mlx-vis: GPU-Native Dimensionality Reduction on Apple Silicon

arXiv:2603.04035v4 Announce Type: replace Abstract: Dimensionality reduction is a foundational tool for visualizing high-dimensional data, yet its reference implementations span a fragmented stack of CPU-bound Python packages that leaves the Metal GPU on Apple Silicon entirely unused. We present mlx-vis, a library that reimplements seven widely used dimensionality reduction methods and k-nearest neighbor graph construction in pure MLX, with every stage -- from PCA preprocessing through embedding optimization to a circle-splatting renderer -- executing on GPU. On Fashion-MNIST 70K, all seven methods embed in 2.1--4.6 s on an M3 Ultra, achieving 3--13x speedups over CPU baselines while reducing the entire dependency stack to MLX and NumPy. The same pipeline scales to ten million points on a single workstation. Code at https://github.com/hanxiao/mlx-vis

Source: arXiv cs.LG | 2026-06-23